Review: pymatgen-core 2026.4.7+dfsg1-2
New Package Report
.changes
| Changed-By | Drew Parsons |
|---|---|
| Architecture | source amd64 |
| Distribution | unstable |
| Date | Fri, 22 May 2026 00:31:15 +0200 |
| Source | pymatgen-core |
| Version | 2026.4.7+dfsg1-2 |
Changelog
pymatgen-core (2026.4.7+dfsg1-2) unstable; urgency=medium
.
* add specific entries to debian/copyright
- docs/proBlue/* © 2010, Kasey Kelly, Issac Kelly
- src/pymatgen/symmetry/symm_ops.yaml GPL-2
- src/pymatgen/util/graph_hashing.py and test_graph_hashing.py
BSD-3 © 2004-2022, NetworkX
- tests/core/elasticity/test_elastic.py
central_diff_weights() in test_get_diff_coeff() is taken from
scipy, licensed under the BSD 3. The remainder is standard
pymatgen (MIT).
* Build-Depends: python3-pytest-xdist <!nocheck>.
Required to support the pytest -n argument in pyproject.toml.
Also Build-Depends: python3-pytest-cov.
pyproject.toml also declares pytest-split, but it is not available
and can be ignored.
* debian/patches/io_lammps_re_match.patch enables lammps test
test_parse_lammps_dumps to pass.
parse_lammps_dumps uses re.match, which fails if + appears in
TEST_DIR (e.g. the + in +dfsg1 when the debian version appears in
the path during chroot builds). Escape any \+ in the lammps file
path to prevent it interfering with the regexp. Replace any
Windows slashes (\\) first to avoid interfering with \+..dsc
| Package-List | python3-pymatgen-core deb python optional arch=any |
|---|---|
| Section | python |
| Priority | optional |
| Component | main |
debian/copyright
Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: pymatgen-core
Upstream-Contact: Shyue Ping Ong <ongsp@eng.ucsd.edu>
Source: https://github.com/materialsproject/pymatgen-core
Files-Excluded: test-files
Files: *
Copyright: 2011-2020 Shyue Ping Ong <ongsp@eng.ucsd.edu>
and the Pymatgen Development Team.
2011-2012 MIT & The Regents of the University of California, through Lawrence Berkeley National Laboratory
License: MIT
Files: docs/assets/orcid.svg
Copyright: 2017-2021 Alainna Therese Wrigley,
Alice Meadows, Laurel Haak
Comment:
Originally from https://doi.org/10.23640/07243.5008697.v4
(https://orcid.figshare.com/articles/figure/ORCID_iD_icon_graphics/5008697)
License: CC0_1.0
CC0 1.0 Universal (CC0 1.0)
.
Public Domain Dedication
.
This is a human-readable summary of the Legal Code.
.
No Copyright
.
The person who associated a work with this deed has dedicated the
work to the public domain by waiving all of his or her rights to the
work worldwide under copyright law, including all related and
neighboring rights, to the extent allowed by law.
.
You can copy, modify, distribute and perform the work, even for
commercial purposes, all without asking permission. See Other
Information below.
.
This license is acceptable for Free Cultural Works.
.
Other Information
.
* In no way are the patent or trademark rights of any person affected
by CC0, nor are the rights that other persons may have in the work
or in how the work is used, such as publicity or privacy rights.
* Unless expressly stated otherwise, the person who associated a work
with this deed makes no warranties about the work, and disclaims
liability for all uses of the work, to the fullest extent permitted
by applicable law.
* When using or citing the work, you should not imply endorsement by
the author or the affirmer.
Files: docs/assets/team-map.html
Copyright: 2012-2021, Plotly, Inc.,
Feross Aboukhadijeh <feross@feross.org>,
2014 Yehuda Katz, Tom Dale, Stefan Penner and contributors
(Conversion to ES6 API by Jake Archibald),
Sindre Sorhus,
2014-2015, Jon Schlinkert,
2016 Sean Connelly (@voidqk)
Comment:
plotly.js v1.57.1 Copyright 2012-2020, Plotly, Inc.
.
buffer module from node.js, for the browser, Feross Aboukhadijeh
<feross@feross.org> <http://feross.org>
.
es6-promise - a tiny implementation of Promises/A+.
Copyright (c) 2014 Yehuda Katz, Tom Dale, Stefan Penner and
contributors (Conversion to ES6 API by Jake Archibald). See
https://raw.githubusercontent.com/stefanpenner/es6-promise/master/LICENSE
version v4.2.8+1e68dce6
.
object-assign (c) Sindre Sorhus
.
pad-left <https://github.com/jonschlinkert/pad-left>
(c) 2014-2015, Jon Schlinkert.
.
2016 Sean Connelly (@voidqk), http://syntheti.cc
Project Home: https://github.com/voidqk/polybooljs
.
License: MIT
Files: docs/proBlue/*
Copyright: 2010, Kasey Kelly, Issac Kelly
License: problue
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions
are met:
.
Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
.
Redistributions in binary form must reproduce the above copyright
notice, this list of conditions and the following disclaimer in the
documentation and/or other materials provided with the distribution.
.
Neither the name "Kelly Creative Tech" nor the names of its
contributors may be used to endorse or promote products derived from
this software without specific prior written permission.
.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS
OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED
AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY
WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
POSSIBILITY OF SUCH DAMAGE.
Files: src/pymatgen/symmetry/symm_ops.yaml
Copyright: AiiDA Developers
License: GPL-2
This file is distributed under the GNU GPL v2 license.
The text of GPLv2 may be found at
/usr/share/common-licenses/GPL-2
Comments:
This file has been modified from cod-tools
(https://aiida-core.readthedocs.io/en/latest/plugins/codtools/),
which is distributed under the GNU GPL v2 license. The main
modifications are with respect to conversion to a YAML format and
removal of the constraints key.
Files: src/pymatgen/util/graph_hashing.py
tests/util/test_graph_hashing.py
Copyright: 2004-2022, NetworkX Developers
Aric Hagberg <hagberg@lanl.gov>
Dan Schult <dschult@colgate.edu>
Pieter Swart <swart@lanl.gov>
License: BSD-3-clause
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions
are met:
.
* Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
.
* Redistributions in binary form must reproduce the above
copyright notice, this list of conditions and the following
disclaimer in the documentation and/or other materials provided
with the distribution.
.
* Neither the name of the NetworkX Developers nor the names of its
contributors may be used to endorse or promote products derived
from this software without specific prior written permission.
.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
Files: tests/core/elasticity/test_elastic.py
Copyright: 2011-2026 Shyue Ping Ong <ongsp@eng.ucsd.edu>
and the Pymatgen Development Team.
2001-2002 Enthought, Inc. 2003-2024, SciPy Developers (central_diff_weights)
License: MIT+BSD3
central_diff_weights() in test_get_diff_coeff() is taken from scipy,
licensed under the BSD 3-Clause license (BSD-3-clause)
2001-2002 Enthought, Inc. 2003-2024, SciPy Developers
.
The remaining code follows the common licence of the pymatgen-core
package.
Files: debian/*
Copyright: 2026 Drew Parsons <dparsons@debian.org>
License: MIT
License: MIT
Permission is hereby granted, free of charge, to any person obtaining
a copy of this software and associated documentation files (the
"Software"), to deal in the Software without restriction, including
without limitation the rights to use, copy, modify, merge, publish,
distribute, sublicense, and/or sell copies of the Software, and to
permit persons to whom the Software is furnished to do so, subject to
the following conditions:
.
The above copyright notice and this permission notice shall be
included in all copies or substantial portions of the Software.
.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
Review Information
rejected — allocated to mechtilde 17 days ago, started 17 days ago, completed 17 days ago.
Final Comment
Hi, please list all authors with their corresponding files and licenses.
The deatils you can find in the public notes
https://dfsg-new-queue.debian.org/reviews/pymatgen-core/2026.4.7+dfsg1-2/
Thanks
Other Reviews of this Package
| Version | Hash | Allocated | Completed | Reviewer | Status | Details |
|---|---|---|---|---|---|---|
| 2026.4.7+dfsg1-3 | 1dfa7540… | 2026-05-23 16:29 | 2026-05-23 16:34 | mechtilde | accepted | VIEW |
| 2026.4.7+dfsg1-1 | 48895c03… | 2026-04-18 17:26 | 2026-04-18 17:31 | mechtilde | accepted | VIEW |
Public Notes
17 days ago
● public
Missed Author Check
Command: dnq author-check
Exit code: 0
Using active review (from current.json): pymatgen-core
Author check: pymatgen-core 2026.4.7+dfsg1-2
Scanned 850 files.
Authors declared in debian/copyright: 19
NOT IN debian/copyright (7):
DueCredit developers
docs/pymatgen.util.html:780
src/pymatgen/util/due.py:11
Florian Knoop, Thomas A.R.Purcell, Matthias Scheffler, Christian Carbogno
docs/pymatgen.electronic_structure.html:3605
docs/pymatgen.phonon.html:752
src/pymatgen/electronic_structure/dos.py:1204
src/pymatgen/phonon/dos.py:432
Free Software Foundation, Inc.
src/pymatgen/symmetry/symm_ops.yaml:9
Google, Inc
docs/_modules/abc.html:47
Materials Project</small>
docs/_includes/footer_custom.html:1
docs/_includes/nav_footer_custom.html:1
MIT & LBNL
README.md:107
Pymatgen Development Team
docs/_modules/abc.html:240
docs/_modules/index.html:287
docs/_modules/monty/dev.html:295
docs/_modules/pathlib.html:1578
docs/_modules/pymatgen.html:175
... and 268 more files
Result: ATTENTION REQUIRED — 7 authors not in debian/copyright
17 days ago
● public
Search for SPDX license declarations
Command: grep -r -B1 'SPDX-'
Exit code: 1
(no output)