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python-pepsickle 0.2.2-1

Package Information

Descriptioncontext-aware proteasomal cleavage prediction

Pepsickle predicts proteasomal cleavage sites in amino acid sequences supplied directly or in FASTA files. It provides models trained on in-vivo epitope data and in-vitro constitutive proteasome or immunoproteasome data, with optional models restricted to human training data.

Predictions include a cleavage probability for each residue and are written in tab-separated format. This package provides the Python module, command-line program and trained prediction models.

MaintainerDebian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed BySteffen Moeller <moeller@debian.org>
Sponsormoeller@debian.org
Distributionunstable
Architectureall
VCSgit: https://salsa.debian.org/med-team/python-pepsickle.git (browse)
Closes#1149772
Trackerhttps://tracker.debian.org/pkg/python-pepsickle
Uploaded2 hours ago

New Package Report

.changes◂
DateFri, 02 Oct 2026 23:14:06 +0200
Sourcepython-pepsickle
Version0.2.2-1
Changed-BySteffen Moeller
Architecturesource all
Distributionunstable
Changelog◂
python-pepsickle (0.2.2-1) unstable; urgency=medium
 .
   * Initial release (Closes: #1149772).
.dsc◂
Priorityoptional
Componentmain
Package-Listpython3-pepsickle deb science optional arch=all
Sectionscience
debian/copyright◂
Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Source: https://github.com/pdxgx/pepsickle
Upstream-Name: pepsickle
Upstream-Contact: Benjamin Weeder <weeder@ohsu.edu>

Files:
 *
Copyright:
 2021 Benjamin Weeder <weeder@ohsu.edu>,
      Mary A. Wood,
      Ellysia Li,
      Abhinav Nellore,
      Reid F. Thompson <thompsre@ohsu.edu>
License: Expat

Files:
 debian/*
Copyright:
 2026 Steffen Moeller <moeller@debian.org>
License: Expat

License: Expat
 Permission is hereby granted, free of charge, to any person obtaining a
 copy of this software and associated documentation files (the "Software"),
 to deal in the Software without restriction, including without limitation
 the rights to use, copy, modify, merge, publish, distribute, sublicense,
 and/or sell copies of the Software, and to permit persons to whom the
 Software is furnished to do so, subject to the following conditions:
 .
 The above copyright notice and this permission notice shall be included
 in all copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
 OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
 IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
 CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
 TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
 SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

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