Review: python-pepsickle 0.2.2-1
Package Information
| Description | context-aware proteasomal cleavage prediction Pepsickle predicts proteasomal cleavage sites in amino acid sequences supplied directly or in FASTA files. It provides models trained on in-vivo epitope data and in-vitro constitutive proteasome or immunoproteasome data, with optional models restricted to human training data. Predictions include a cleavage probability for each residue and are written in tab-separated format. This package provides the Python module, command-line program and trained prediction models. |
|---|---|
| Maintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Changed By | Steffen Moeller <moeller@debian.org> |
| Sponsor | moeller@debian.org |
| Distribution | unstable |
| Architecture | all |
| VCS | git: https://salsa.debian.org/med-team/python-pepsickle.git (browse) |
| Closes | #1149772 |
| Tracker | https://tracker.debian.org/pkg/python-pepsickle |
| Uploaded | 19 days ago |
New Package Report
.changes
| Architecture | source all |
|---|---|
| Distribution | unstable |
| Date | Fri, 02 Oct 2026 23:14:06 +0200 |
| Source | python-pepsickle |
| Version | 0.2.2-1 |
| Changed-By | Steffen Moeller <moeller@debian.org> |
Changelog
python-pepsickle (0.2.2-1) unstable; urgency=medium . * Initial release (Closes: #1149772).
.dsc
| Package-List | python3-pepsickle deb science optional arch=all |
|---|---|
| Section | science |
| Priority | optional |
| Component | main |
debian/copyright
Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Source: https://github.com/pdxgx/pepsickle
Upstream-Name: pepsickle
Upstream-Contact: Benjamin Weeder <weeder@ohsu.edu>
Files:
*
Copyright:
2021 Benjamin Weeder <weeder@ohsu.edu>,
Mary A. Wood,
Ellysia Li,
Abhinav Nellore,
Reid F. Thompson <thompsre@ohsu.edu>
License: Expat
Files:
debian/*
Copyright:
2026 Steffen Moeller <moeller@debian.org>
License: Expat
License: Expat
Permission is hereby granted, free of charge, to any person obtaining a
copy of this software and associated documentation files (the "Software"),
to deal in the Software without restriction, including without limitation
the rights to use, copy, modify, merge, publish, distribute, sublicense,
and/or sell copies of the Software, and to permit persons to whom the
Software is furnished to do so, subject to the following conditions:
.
The above copyright notice and this permission notice shall be included
in all copies or substantial portions of the Software.
.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Review Information
accepted — allocated to mechtilde 19 days ago, started 19 days ago, completed 19 days ago.